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Y-patch weight matrix

Position
 -10
  -9
  -8
  -7
  -6
  -5
  -4
  -3
  -2
  -1
   0
  A       C       G       T

-0.82 -0.34 -0.56  0.00
-1.06 -0.59 -0.52  0.00
-1.32 -0.53 -0.92  0.00
-1.40 -0.33 -1.17  0.00
-2.12 -0.44 -1.15  0.00
-1.68 -0.55 -1.27  0.00
-2.13 -0.12 -1.42  0.00
-3.25 -0.33 -1.88  0.00
-4.73 -0.61 -4.49  0.00
-4.45  0.00 -4.45 -0.28
-0.51 -5.17  0.00 -5.17


Reference position: 11 (last in the matrix)

Optimized cut-off value: -5.58 (80.16%)

Expected location: at the TSS

Last update November 2024