cap signal base frequency table and weigth matrix
| -3 | -2 | -1 | 0 | 1 | 2 | 3 | 4 | 5 | |
| # A | 49 | 0 | 288 | 26 | 77 | 67 | 45 | 50 | |
| # C | 48 | 303 | 0 | 81 | 95 | 118 | 85 | 96 | |
| # G | 69 | 0 | 0 | 116 | 0 | 46 | 73 | 56 | |
| # T | 137 | 0 | 15 | 80 | 131 | 72 | 100 | 101 | |
| W(A) | -1.14 | -5.26 | 0.00 | -1.51 | -0.65 | -0.55 | -0.91 | -0.82 | |
| W(C) | -1.16 | 0.00 | -5.21 | -0.41 | -0.45 | 0.00 | -0.29 | -0.18 | |
| W(G) | -0.75 | -5.26 | -5.21 | 0.00 | -4.56 | -0.86 | -0.38 | -0.65 | |
| W(T) | 0.00 | -5.26 | -2.74 | -0.29 | 0.00 | -0.36 | 0.00 | 0.00 | |
| Consensus | t/g | C | A/t | g/t/c | T/c/a | c/t | t/c/g | t/c | |
| Preferred region: Position 0 between 1 and +5 relative to transcription start site. | |||||||||
| Optimizid cut-off value: -3.75 (81.4%) | |||||||||
Last update November 2024